PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 71079
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas; Micromonas pusilla
Family C2H2
Protein Properties Length: 1202aa    MW: 126800 Da    PI: 5.6264
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
71079genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.60.40.4209.5E-1275174IPR008972Cupredoxin
SuperFamilySSF495032.75E-1193181IPR008972Cupredoxin
PROSITE profilePS5015710.45392419IPR007087Zinc finger, C2H2
PROSITE patternPS000280394414IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1202 aa     Download sequence    Send to blast
MATSPPSIAR DTPPTWDEEL ALAETDESSD DDDEEQRIAR PTTWVGGGAR TASPLITTTS  60
PTNNNSNSNS SATTATTTTI STPPPPPSSA KIWIDEMRFV PADLTVRVGT TVAWSQLESC  120
ASRNFLEIVD DDEAPVAASP PLAAGESWSW TFDACGSYHF RSLVYVFMKG SVTVVDADVA  180
GDVATTGGAD GNKEDAGIVV ADAYDFDASP EAAAAARLEK RAENRERRVR AAEEEKARAT  240
RAAEGMMREI ESRAQAEAAT LFSSDDDDDD DNDGNGGTNG TPYAALASSD DEEAEEAAAM  300
NTTTTETTEI EIETEVETKW RLEVEEREAS RPVTVSQLLE RTNERRLSAT LSETSSGRGS  360
GANLPETAGL SPLSSTFSSS SIPVPTHPTP TARCDKCKRA FASTTNLARH RQSHRFDGKS  420
GRHGKPFVPP ATREQLAACW RNLCAETRRE VLDLGVGGEA GVLVLTAFAS RGPGSFALVS  480
SGVNNKDLNG DVPADGGSGD VRARYAAAGD VLRTYVDGDV NVAKTVDADA FLTALHDASE  540
GGFLGPKCAV DLSSMVSERN LEAALALLLE ERLMRAYVKE RGAEAERTQR LLMAELDEAA  600
ADKERREAQK MKMKAKKAKQ KSRKRAGAGA GAGAGATETG GKSTAHDSDG DDDRGGDGDG  660
GGGVDDDVDE DARREEEKRR AEAEERAAAS EREHRRNEAA AAAAAAEYAE REAREAVARA  720
RRRESAAKAV EAAAETTTEA AAAFAVGGGA LAASPYGKGR AKTAAAAAAA AAVGAXXXXX  780
XXPGPPPGPP PVATPVAAPT TPTTSRHPVH GDIPVAQLWT PPRDSAPPTA SPAYDAPPVA  840
IAVPAPPPPG PPPAAYAHPG PYPPPGGAYG VPAMAPHGLH MGAYDALYVH HYMQAMASLH  900
QQHLAGGALP AETLAPAPAP APTTSGAPIS RTRRDLSRNE TRDAVRKVTP LGAPHASRSR  960
PSALTGDLES TPPRTTRRSA RVTRDRRRVA RKRTRLRVKK EYLQHSAHSH HIQPQPHEVR  1020
QQPFVSISCT LFFGKFFLAM RISVSAAVFC VLFALQVSQV QASLGPVQHD GIKMPAGVST  1080
PKSIGFSEII ERGPDRRTMR DESAFATCVL RRFASGGAFA ASNTVIFPVE TMGGNYCFAS  1140
EEDCCELNAG LVAGIVIGCT VGLTLLIVAC AWCCKCCCFQ RKVQPAQPGV VMMQPAYVLP  1200
K*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-